Hello,
I am trying to run a session on renku v2 project Reproducible Data Science | Open Research | Renku.
I tried resources with 500GB, which should be more than sufficient, but launching session keeps giving error of kind “no space left on device”.
I can run the underlying custom docker image for the renku v1 project on renkulab without problems.
So the problem is either linked to the OADAT data source on renku v2, or something else with renku v2 (which was not there sometime ago, as this is also a project created by renku as a demo).
Can someone help me fixing this?
I need it running soon for a student project.
If you just want to see the error logs when building session, here it is:
2024-08-30T12:38:11.786307746Z INFO:root:Checking if the repo already exists.
2024-08-30T12:38:11.786581294Z INFO:root:/home/jovyan/work/oadat-evaluate does not exist, creating it.
2024-08-30T12:38:11.790834472Z INFO:root:Requesting token for provider INTERNAL_GITLAB
2024-08-30T12:38:11.853258767Z INFO:root:Got token response for INTERNAL_GITLAB
2024-08-30T12:38:11.854946713Z INFO:root:Initializing repo
2024-08-30T12:38:11.865350223Z INFO:root:Setting email firat.ozdemir@sdsc.ethz.ch in git config
2024-08-30T12:38:11.870267300Z INFO:root:Setting name ‘Firat Özdemir’ in git config
2024-08-30T12:38:11.889193631Z INFO:root:Cloning repository oadat-evaluate from Firat Özdemir / oadat-evaluate · GitLab
2024-08-30T12:38:37.316461882Z INFO:root:Cleaning up git credentials after cloning.
2024-08-30T12:38:37.322319999Z WARNING:root:Git plaintext credentials were deleted but could not be unset in the repository’s config, most likely because the repository has been deleted. Detailed error: (4, ‘’, ‘error: failed to write new configuration file /home/jovyan/work/oadat-evaluate/.git/config.lock\n’)
2024-08-30T12:38:37.325136661Z ERROR:root:Cannot clone Firat Özdemir / oadat-evaluate · GitLab
2024-08-30T12:38:37.325167068Z Traceback (most recent call last):
2024-08-30T12:38:37.325175596Z File “/app/git_services/init/cloner.py”, line 229, in _clone
2024-08-30T12:38:37.325183391Z repository.git_cli.git_fetch(self.remote_name)
2024-08-30T12:38:37.325190880Z File “/app/git_services/cli/init.py”, line 64, in git_fetch
2024-08-30T12:38:37.325198579Z return self._execute_command(“git”, “fetch”, *args)
2024-08-30T12:38:37.325207038Z ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2024-08-30T12:38:37.325214571Z File “/app/git_services/cli/init.py”, line 36, in _execute_command
2024-08-30T12:38:37.325222133Z raise GitCommandError(res.returncode, stdout, stderr)
2024-08-30T12:38:37.325229513Z git_services.cli.GitCommandError: (128, ‘’, ‘fatal: write error: No space left on device\nfatal: index-pack failed\n’)
2024-08-30T12:38:37.325237441Z
2024-08-30T12:38:37.325244291Z The above exception was the direct cause of the following exception:
2024-08-30T12:38:37.325251765Z
2024-08-30T12:38:37.325259205Z Traceback (most recent call last):
2024-08-30T12:38:37.325266622Z File “/app/git_services/init/cloner.py”, line 289, in run_helper
2024-08-30T12:38:37.325274128Z self._clone(repository)
2024-08-30T12:38:37.325281385Z File “/app/git_services/init/cloner.py”, line 231, in _clone
2024-08-30T12:38:37.325288836Z raise errors.GitFetchError from err
2024-08-30T12:38:37.325295855Z git_services.init.errors.GitFetchError
2024-08-30T12:38:37.503260008Z Traceback (most recent call last):
2024-08-30T12:38:37.503653546Z File “/app/git_services/init/cloner.py”, line 229, in _clone
2024-08-30T12:38:37.503692157Z repository.git_cli.git_fetch(self.remote_name)
2024-08-30T12:38:37.503700666Z File “/app/git_services/cli/init.py”, line 64, in git_fetch
2024-08-30T12:38:37.503708252Z return self._execute_command(“git”, “fetch”, *args)
2024-08-30T12:38:37.503715881Z ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2024-08-30T12:38:37.503722967Z File “/app/git_services/cli/init.py”, line 36, in _execute_command
2024-08-30T12:38:37.503730485Z raise GitCommandError(res.returncode, stdout, stderr)
2024-08-30T12:38:37.503737621Z git_services.cli.GitCommandError: (128, ‘’, ‘fatal: write error: No space left on device\nfatal: index-pack failed\n’)
2024-08-30T12:38:37.503849382Z
2024-08-30T12:38:37.503875731Z The above exception was the direct cause of the following exception:
2024-08-30T12:38:37.503882387Z
2024-08-30T12:38:37.503887369Z Traceback (most recent call last):
2024-08-30T12:38:37.503892442Z File “/app/git_services/init/cloner.py”, line 289, in run_helper
2024-08-30T12:38:37.503897980Z self._clone(repository)
2024-08-30T12:38:37.503903270Z File “/app/git_services/init/cloner.py”, line 231, in _clone
2024-08-30T12:38:37.503908396Z raise errors.GitFetchError from err
2024-08-30T12:38:37.503913355Z git_services.init.errors.GitFetchError
2024-08-30T12:38:37.503918558Z
2024-08-30T12:38:37.503923245Z During handling of the above exception, another exception occurred:
2024-08-30T12:38:37.503928232Z
2024-08-30T12:38:37.503932915Z OSError: [Errno 28] No space left on device
2024-08-30T12:38:37.503937901Z
2024-08-30T12:38:37.503942650Z During handling of the above exception, another exception occurred:
2024-08-30T12:38:37.503947605Z
2024-08-30T12:38:37.503952254Z Traceback (most recent call last):
2024-08-30T12:38:37.504111360Z File “”, line 198, in _run_module_as_main
2024-08-30T12:38:37.504128114Z File “”, line 88, in _run_code
2024-08-30T12:38:37.504144845Z File “/app/git_services/init/clone.py”, line 23, in
2024-08-30T12:38:37.504152874Z git_cloner.run(storage_mounts=config.storage_mounts)
2024-08-30T12:38:37.504164156Z File “/app/git_services/init/cloner.py”, line 261, in run
2024-08-30T12:38:37.504171676Z self.run_helper(repository, storage_mounts=storage_mounts)
2024-08-30T12:38:37.504178916Z File “/app/git_services/init/cloner.py”, line 292, in run_helper
2024-08-30T12:38:37.504186404Z with open(
2024-08-30T12:38:37.504265131Z OSError: [Errno 28] No space left on device