# General

**URL:** https://renku.discourse.group/c/general/1.md?page=1

[Latest](https://renku.discourse.group/latest.md) · [Categories](https://renku.discourse.group/categories.md)

**Page:** 2

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## [Renku-mls doesn't export the graph into the knowledgegraph](https://renku.discourse.group/t/renku-mls-doesnt-export-the-graph-into-the-knowledgegraph/1057)

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**Author:** [@micloc](https://renku.discourse.group/u/micloc)\
**Replies:** 1\
**Last updated:** [21 June 2024 12:29 UTC](https://renku.discourse.group/t/renku-mls-doesnt-export-the-graph-into-the-knowledgegraph/1057 "2024-06-21T12:29:23Z")

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Hi together We would like to use your plugin “Renku MLS” to log and track models. We will follow your example: GitHub - SwissDataScienceCenter/renku-mls: MLSchema plugin for Renku to export the specified model parameter…

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## [Renkulab for summer school (4 days)](https://renku.discourse.group/t/renkulab-for-summer-school-4-days/1056)

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**Author:** [@pohleric](https://renku.discourse.group/u/pohleric)\
**Replies:** 2\
**Last updated:** [13 June 2024 12:58 UTC](https://renku.discourse.group/t/renkulab-for-summer-school-4-days/1056 "2024-06-13T12:58:56Z")

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Hello, As part of research activities and capacity building in Central Asia (Kyrgyzstan, Uzbekistan, and Tajikistan) we (Geography @Uni Fribourg) want to teach a group of students a hydrological model that runs in pytho…

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## [Add code from different project](https://renku.discourse.group/t/add-code-from-different-project/89)

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**Author:** [@schymans](https://renku.discourse.group/u/schymans)\
**Replies:** 20\
**Last updated:** [22 May 2024 17:36 UTC](https://renku.discourse.group/t/add-code-from-different-project/89 "2024-05-22T17:36:43Z")

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I would like to be able to transparently import code files from other projects, similar to renku dataset add. For example, I would like to use https://renkulab.io/projects/remko.nijzink/vomcases/files/blob/src\_py/plot\_et…

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## [CondaHTTPError when building docker image](https://renku.discourse.group/t/condahttperror-when-building-docker-image/1049)

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**Author:** [@SerAcero](https://renku.discourse.group/u/SerAcero)\
**Replies:** 3\
**Last updated:** [21 May 2024 15:17 UTC](https://renku.discourse.group/t/condahttperror-when-building-docker-image/1049 "2024-05-21T15:17:58Z")

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Hello, My CI pipeline fails due to a CondaHTTPError. Very concisely: My .gitlab-ci.yml gets to the command: docker build --pull -t "$CI\_REGISTRY\_IMAGE/image\_name" -f dockerfile\_name . The dockerfile comma…

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## [How to ensure reproducibility of environment?](https://renku.discourse.group/t/how-to-ensure-reproducibility-of-environment/181)

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**Author:** [@schymans](https://renku.discourse.group/u/schymans)\
**Replies:** 18\
**Last updated:** [17 May 2024 07:22 UTC](https://renku.discourse.group/t/how-to-ensure-reproducibility-of-environment/181 "2024-05-17T07:22:02Z")

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When I specify an environment in Dockerfile, environment.yml and requirements.txt, I can specify versions of the different packages or leave out that information. If I don’t specify a version, the currently up-to-date ve…

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## [SSH into your Renku session from your favourite IDE](https://renku.discourse.group/t/ssh-into-your-renku-session-from-your-favourite-ide/1034)

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**Author:** [@elisabetc](https://renku.discourse.group/u/elisabetc)\
**Replies:** 0\
**Last updated:** [18 April 2024 12:11 UTC](https://renku.discourse.group/t/ssh-into-your-renku-session-from-your-favourite-ide/1034 "2024-04-18T12:11:29Z")

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Develop locally, run in the cloud! The SSH feature in Renku is extremely easy to use and allows you to work comfortably from your favourite IDE in your Renku session in the cloud. Even more, you can even work collaborat…

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## [Start session link automatically fetching LFS data?](https://renku.discourse.group/t/start-session-link-automatically-fetching-lfs-data/1030)

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**Author:** [@colinem](https://renku.discourse.group/u/colinem)\
**Replies:** 5\
**Last updated:** [28 March 2024 14:56 UTC](https://renku.discourse.group/t/start-session-link-automatically-fetching-lfs-data/1030 "2024-03-28T14:56:15Z")

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Hi, Is there a possibility to create a start session link with the option automatically fetch LFS data? I tried to go around this question, changing the .renku/renku.init with fs\_threshold = 4mb. But it did not solve m…

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## [Gurobi License verification Error](https://renku.discourse.group/t/gurobi-license-verification-error/1009)

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**Author:** [@kalyanchakravarthys](https://renku.discourse.group/u/kalyanchakravarthys)\
**Replies:** 3\
**Last updated:** [7 March 2024 12:37 UTC](https://renku.discourse.group/t/gurobi-license-verification-error/1009 "2024-03-07T12:37:50Z")

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I am seeing the below after configuring a WEBFLOATCS license for the Gurobi Compute deployed in GKE. License Status - Invalid Error - Too many sessions, 1 active sessions for a baseline of 1 The license → info section…

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## [Roadmap Update • March 2024](https://renku.discourse.group/t/roadmap-update-march-2024/1014)

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**Author:** [@laura.kinkead](https://renku.discourse.group/u/laura.kinkead)\
**Replies:** 0\
**Last updated:** [5 March 2024 12:15 UTC](https://renku.discourse.group/t/roadmap-update-march-2024/1014 "2024-03-05T12:15:29Z")

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We are building the next generation of Renku! And we want your input along the way. A Renku project brings together your code, data, compute resources all in one place. In ‘Renku 2.0’, combining these resources will be …

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## [Ipywidgets issues](https://renku.discourse.group/t/ipywidgets-issues/993)

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**Author:** [@amoulin55](https://renku.discourse.group/u/amoulin55)\
**Replies:** 2\
**Last updated:** [4 March 2024 09:31 UTC](https://renku.discourse.group/t/ipywidgets-issues/993 "2024-03-04T09:31:57Z")

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I am using ipywidgets interact in a Renku project, and bizarrely, it works only sometimes. Each time Renku has a server error and need to reinstall ipywidgets, interact might work or not. By not working I mean that the d…

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## [Data confidentiality level](https://renku.discourse.group/t/data-confidentiality-level/1003)

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**Author:** [@JDawnDuan](https://renku.discourse.group/u/JDawnDuan)\
**Replies:** 1\
**Last updated:** [21 February 2024 15:08 UTC](https://renku.discourse.group/t/data-confidentiality-level/1003 "2024-02-21T15:08:39Z")

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Dear community, I am working on a project constructing sample datasets for a meta analysis. Now I am concerned about what kind of data I can upload to the project. Because there might be some unpublished data, I would lo…

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## [Renkulab Update: Universal Cloud storage and managing sessions](https://renku.discourse.group/t/renkulab-update-universal-cloud-storage-and-managing-sessions/998)

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**Author:** [@elisabetc](https://renku.discourse.group/u/elisabetc)\
**Replies:** 0\
**Last updated:** [15 February 2024 09:34 UTC](https://renku.discourse.group/t/renkulab-update-universal-cloud-storage-and-managing-sessions/998 "2024-02-15T09:34:12Z")

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Universal Cloud Storage Working with your data in Renku is now faster and simpler. Starting with Renku 0.47.0, you can write and read your data from your preferred cloud storage (e.g. s3, blob, switchdrive, polybox). You…

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## [Cannot create project to a namespace astronomy/mmoda](https://renku.discourse.group/t/cannot-create-project-to-a-namespace-astronomy-mmoda/990)

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**Author:** [@carloferrigno](https://renku.discourse.group/u/carloferrigno)\
**Replies:** 0\
**Last updated:** [1 February 2024 12:29 UTC](https://renku.discourse.group/t/cannot-create-project-to-a-namespace-astronomy-mmoda/990 "2024-02-01T12:29:13Z")

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Hello, I cannot create anymore a renku project into the namespace astronomy/mmoda but the owner of the group assured me that I am still part of it. Could you investigate ? Note that some time ago, I created Reproducibl…

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## [The target project is not a Renku project?](https://renku.discourse.group/t/the-target-project-is-not-a-renku-project/988)

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**Author:** [@carloferrigno](https://renku.discourse.group/u/carloferrigno)\
**Replies:** 3\
**Last updated:** [31 January 2024 13:21 UTC](https://renku.discourse.group/t/the-target-project-is-not-a-renku-project/988 "2024-01-31T13:21:39Z")

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Hello, I have a very strange isssue with one of my projects It complains that it is not a renku project, it cannot establish the renku version, there is no template However, I used ARG RENKU\_BASE\_IMAGE=renku/renkula…

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## [Renku.api working depends on where script is run](https://renku.discourse.group/t/renku-api-working-depends-on-where-script-is-run/987)

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**Author:** [@LiliGasser](https://renku.discourse.group/u/LiliGasser)\
**Replies:** 2\
**Last updated:** [30 January 2024 16:10 UTC](https://renku.discourse.group/t/renku-api-working-depends-on-where-script-is-run/987 "2024-01-30T16:10:13Z")

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Dear all, in ADORE, there are 3 scripts with renku.api code. Here only the relevant snippets from the first script: # import from renku.api import Output # output df\_t.to\_csv(Output("ecotox\_tests", path\_to\_file), inde…

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## [Call for feedback: New RenkuLab Compute Sessions](https://renku.discourse.group/t/call-for-feedback-new-renkulab-compute-sessions/985)

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**Author:** [@laura.kinkead](https://renku.discourse.group/u/laura.kinkead)\
**Replies:** 0\
**Last updated:** [25 January 2024 16:41 UTC](https://renku.discourse.group/t/call-for-feedback-new-renkulab-compute-sessions/985 "2024-01-25T16:41:46Z")

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You may have heard that we are building the next generation of Renku! And we want your input along the way. We are rethinking how compute sessions work on RenkuLab. As part of our open design process, you can find our d…

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## [🛠 Renkulab maintenance on Jan 25th](https://renku.discourse.group/t/renkulab-maintenance-on-jan-25th/982)

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**Author:** [@elisabetc](https://renku.discourse.group/u/elisabetc)\
**Replies:** 0\
**Last updated:** [24 January 2024 13:20 UTC](https://renku.discourse.group/t/renkulab-maintenance-on-jan-25th/982 "2024-01-24T13:20:15Z")

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:hammer\_and\_wrench: Renkulab maintenance :date: Date: 2024-01-25T13:00:00Z (UTC)→2024-01-25T14:00:00Z (UTC) :fox\_face: Component: Renku GitLab :exclamation: Impact: RenkuLab GitLab will not be available during the maint…

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## [UI: Dataset import takes too long](https://renku.discourse.group/t/ui-dataset-import-takes-too-long/977)

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**Author:** [@LiliGasser](https://renku.discourse.group/u/LiliGasser)\
**Replies:** 1\
**Last updated:** [22 January 2024 13:21 UTC](https://renku.discourse.group/t/ui-dataset-import-takes-too-long/977 "2024-01-22T13:21:56Z")

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Dear renku team, I would like to import datasets into a new renku project, e.g., the chemicals dataset into the adore-modeling repo. I could import the same datasets before into mltox-model. I have tried several times …

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## [Project broken, update not possible, error:project not supported, cannot migrate](https://renku.discourse.group/t/project-broken-update-not-possible-error-project-not-supported-cannot-migrate/980)

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**Author:** [@pohleric](https://renku.discourse.group/u/pohleric)\
**Replies:** 2\
**Last updated:** [19 January 2024 11:53 UTC](https://renku.discourse.group/t/project-broken-update-not-possible-error-project-not-supported-cannot-migrate/980 "2024-01-19T11:53:47Z")

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I just restarted my project to install a new R package (which is not supported anyways) and find myself not being able to start the project anymore. The renku version is very old (1.11.2), and the update function (button…

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## [🛠 Renkulab maintenance on Dec.12, 2023](https://renku.discourse.group/t/renkulab-maintenance-on-dec-12-2023/968)

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**Author:** [@elisabetc](https://renku.discourse.group/u/elisabetc)\
**Replies:** 0\
**Last updated:** [11 December 2023 08:42 UTC](https://renku.discourse.group/t/renkulab-maintenance-on-dec-12-2023/968 "2023-12-11T08:42:23Z")

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:hammer\_and\_wrench: Renkulab maintenance :date: Date: 2023-12-12T14:30:00Z (UTC)→2023-12-12T16:00:00Z (UTC) :fox\_face: Component: Renku GitLab :exclamation: Impact: RenkuLab GitLab will not be available during the maint…

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## [Renku and apptainer](https://renku.discourse.group/t/renku-and-apptainer/967)

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**Author:** [@mrawlik](https://renku.discourse.group/u/mrawlik)\
**Replies:** 1\
**Last updated:** [8 December 2023 17:12 UTC](https://renku.discourse.group/t/renku-and-apptainer/967 "2023-12-08T17:12:05Z")

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To run renku images on an own machine docker is necessary. HPC infrastructure, however, often uses apptainer. Normally is possible to convert docker images to apptainer’s sif format. Has anyone tried it with renku?

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## [Renku login leads to git push failure](https://renku.discourse.group/t/renku-login-leads-to-git-push-failure/960)

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**Author:** [@bopekno](https://renku.discourse.group/u/bopekno)\
**Replies:** 5\
**Last updated:** [7 December 2023 15:59 UTC](https://renku.discourse.group/t/renku-login-leads-to-git-push-failure/960 "2023-12-07T15:59:05Z")

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Hi, Since very recently, I am not able to push on my renkulab-hosted project from within the renku session, even after successfully logging into renkulab using renku login renkulab.io and clicking yes on the linked page…

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## [Is it possible to publish code through Renku?](https://renku.discourse.group/t/is-it-possible-to-publish-code-through-renku/59)

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**Author:** [@jen-thomas](https://renku.discourse.group/u/jen-thomas)\
**Replies:** 19\
**Last updated:** [5 December 2023 10:03 UTC](https://renku.discourse.group/t/is-it-possible-to-publish-code-through-renku/59 "2023-12-05T10:03:13Z")

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We would like to be able to publish the code of a Renku project/repo to get a DOI so that it can be referenced. I wondered if this is already possible?

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## [Paused session: time to deletion](https://renku.discourse.group/t/paused-session-time-to-deletion/963)

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**Author:** [@lgatto](https://renku.discourse.group/u/lgatto)\
**Replies:** 1\
**Last updated:** [3 December 2023 15:48 UTC](https://renku.discourse.group/t/paused-session-time-to-deletion/963 "2023-12-03T15:48:55Z")

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The announcement mentions that paused session will be deleted after 15 days. I however just paused the following session, but it says that the paused session will be deleted 1 week from now.

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## [What is the correct Renkulab container registry address?](https://renku.discourse.group/t/what-is-the-correct-renkulab-container-registry-address/958)

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**Author:** [@champost](https://renku.discourse.group/u/champost)\
**Replies:** 4\
**Last updated:** [24 November 2023 15:07 UTC](https://renku.discourse.group/t/what-is-the-correct-renkulab-container-registry-address/958 "2023-11-24T15:07:29Z")

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Hello, I am trying to setup Renku locally for researchers relying on various platforms (i.e OS) and different Container engines. To reproduce the Renkulab experience locally, I am “reusing Docker images” built on Renku…

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## [Renku dataset import crashes](https://renku.discourse.group/t/renku-dataset-import-crashes/945)

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**Author:** [@bopekno](https://renku.discourse.group/u/bopekno)\
**Replies:** 2\
**Last updated:** [9 November 2023 16:29 UTC](https://renku.discourse.group/t/renku-dataset-import-crashes/945 "2023-11-09T16:29:14Z")

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Dear Renku team, Importing a dataset from zenodo yields the “you found a bug” message. To reproduce: renku dataset import --short-name N\_hg19\_L\_2.5e5kb -y https://zenodo.org/records/8117257 in this brand new project: R…

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## [Where is Renku headed?](https://renku.discourse.group/t/where-is-renku-headed/918)

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**Author:** [@sympythy](https://renku.discourse.group/u/sympythy)\
**Replies:** 2\
**Last updated:** [26 September 2023 15:42 UTC](https://renku.discourse.group/t/where-is-renku-headed/918 "2023-09-26T15:42:42Z")

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Hello, We plan to deploy a datascience platform for our institute, and we certainly don’t want to reinvent the wheel. Renku is on our radar and we’d like to know a bit more about future developments, before going any f…

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## [Thoughts arising from the Renku user group meeting](https://renku.discourse.group/t/thoughts-arising-from-the-renku-user-group-meeting/914)

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**Author:** [@RichardJActon](https://renku.discourse.group/u/RichardJActon)\
**Replies:** 1\
**Last updated:** [19 September 2023 06:54 UTC](https://renku.discourse.group/t/thoughts-arising-from-the-renku-user-group-meeting/914 "2023-09-19T06:54:20Z")

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I just wanted to share some thought’s that I had written down in my notes following on from the Renku user group meeting that was recently held in Bern that I attended remotely. These cover a pretty broad range of topics…

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## [Docker image not found](https://renku.discourse.group/t/docker-image-not-found/911)

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**Author:** [@Rengervn](https://renku.discourse.group/u/Rengervn)\
**Replies:** 2\
**Last updated:** [18 September 2023 07:58 UTC](https://renku.discourse.group/t/docker-image-not-found/911 "2023-09-18T07:58:54Z")

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Hi This morning I wanted to start my project on Renku, but my docker file was not found. " The Docker image build failed. You can use the base image to start a session, but project-specific dependencies will not be ava…

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## [Renkulab.io "start session" interface is stuck after August upgrade](https://renku.discourse.group/t/renkulab-io-start-session-interface-is-stuck-after-august-upgrade/886)

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**Author:** [@andriineronov](https://renku.discourse.group/u/andriineronov)\
**Replies:** 13\
**Last updated:** [1 September 2023 09:08 UTC](https://renku.discourse.group/t/renkulab-io-start-session-interface-is-stuck-after-august-upgrade/886 "2023-09-01T09:08:38Z")

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I am coming back to my projects after the recent renkulab upgrade in august 2023, and I have a problem with reviving the projects, one example is astronomy/mmoda/gaia. If looks Ok when I just look at the files, but when …

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